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    <title>QUT.Bio External Dependencies</title>
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<h1>QUT.Bio external dependencies</h1>

<p>
	The QUT.Bio library and applications leverage a number of third-party libraries 
	which you will need to obtain in order to use QUT.Bio.
	Copies of third party libraries are not included as part of the QUT.Bio distribution.
	Instead, you will need to download the libraries and (if you like doing things the easy way) 
	copy the associated assemblies to one of the two
	&ldquo;External dependencies&rdquo; directories.
	Once the assemblies have been copied to the right place, build should pick them up without 
	any further action on your part.
</p>
<p>
	The directions below assume that you have unzipped QUT.Bio into a directory called 
	<code>c:\bio</code>. The upper levels of the directory tree then should look like: 
</p>
<pre>   c:\
    +-- bio
         +-- QUT.Bio
              +-- Silverlight
                   +-- <span style="color:Fuchsia">External dependencies</span>
                   +-- QUT.Bio
                   +-- SilverMap
              +-- Windows
                   +-- BlastExplorer
                   +-- DBLoader
                   +-- <span style="color:Fuchsia">External dependencies</span>
                   +-- QUT.Bio
                   +-- QUT.Bio.Web
                   +-- SilverMap
                   +-- TaxToXml</pre>
<p>
	The third-party libraries are listed below.
	For each library, download and install the library, then 
	locate the corresponding dll(s) and copy them to the folder 
	in which this document is stored.
</p>
<div style="margin-left:0.25in">
	<table cellpadding="3" cellspacing="0" border="1">
		<tr>
			<td valign="top"><strong>Library name</strong></td>
			<td valign="top"><strong>Assembly</strong></td>
			<td valign="top"><strong>Download address</strong></td>
			<td valign="top" width="1%"><strong>Copy to <span style="color:Fuchsia">External dependencies</span> folder</strong></td>
		</tr>
		<tr>
			<td valign="top">Microsoft Biology Foundation (MBF) Beta 1</td>
			<td valign="top"><code>Bio.dll</code></td>
			<td valign="top"><a href="https://connect.microsoft.com/BIO/Downloads">https://connect.microsoft.com/BIO/Downloads</a></td>
			<td valign="top">Windows</td>
		</tr>
		<tr>
			<td valign="top">DotNetOpenAuth 3.3.1</td>
			<td valign="top"><code>DotNetOpenAuth.dll</code></td>
			<td valign="top"><a href="http://code.google.com/p/dotnetopenid/wiki/Downloads?tm=2">http://code.google.com/p/dotnetopenid/wiki/Downloads?tm=2</a></td>
			<td valign="top">Windows</td>
		</tr>
		<tr>
			<td valign="top">SemWeb 1.064</td>
			<td valign="top">
				<code>IKVM.GNU.Classpath.dll</code><br />
				<code>IKVM.Runtime.dll</code><br />
				<code>SemWeb.dll</code><br />
				<code>SemWeb.Sparql.dll</code><br />
				<code>sparql-core.dll</code><br />
			</td>
			<td valign="top"><a href="http://razor.occams.info/code/semweb/">http://razor.occams.info/code/semweb/</a></td>
			<td valign="top">Windows</td>
		</tr>
		<tr>
			<td valign="top">WPF Toolkit</td>
			<td valign="top"><code>WPFToolkit.dll</code></td>
			<td valign="top"><a href="http://wpf.codeplex.com/Release/ProjectReleases.aspx?ReleaseId=29117">http://wpf.codeplex.com/Release/ProjectReleases.aspx?ReleaseId=29117</a></td>
			<td valign="top">Not applicable (see note below)</td>
		</tr>
		<tr>
			<td valign="top">Silverlight Toolkit</td>
			<td valign="top"><code>SilverlightToolkit.dll</code></td>
			<td valign="top"><a href="http://www.codeplex.com/Silverlight/">http://www.codeplex.com/Silverlight/</a></td>
			<td valign="top">Not applicable (see note below)</td>
		</tr>
		<tr>
			<td valign="top">Watermarked text box</td>
			<td valign="top"><code>WPFToolkit.dll</code></td>
			<td valign="top"><a href=""></a></td>
			<td valign="top">Windows</td>
		</tr>
	</table>
</div>

<h2>Notes</h2>
<ul>
	<li>The WPF Toolkit installer should make WPFToolkit.dll known to visual studio, so it is not necessary to copy this file into the QUT.Bio directory tree.</li>
</ul>

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